聖塔非研究所

摘要 Background: Orthology analysis is an important pa

2011 · 已發表論文 · 更新 2026/08/30 下午12:48

摘要 Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular 系統發育s. The ever increasing flood of sequenc…

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  • 類型:已發表論文
  • 日期:2011

摘要

Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular 系統發育s. The ever-increasing flood of sequence data, and hence the rapidly increasing number of 基因組s that can be compared simultaneously, calls for efficient software tools as brute-force approaches with quadratic memory requirements become infeasible in practise. The rapid pace at which new data become available, furthermore, makes it desirable to compute 基因組-wide orthology relations for a given dataset rather than relying on relations listed in databases. Results: The program 蛋白質ortho described here is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It imple

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