聖塔非研究所

Growthcurver:一個 R 包,用於從微生物生長曲線中獲得可解釋的指標

2016-04-19 · 已發表論文 · 更新 2026/08/30 下午12:48

摘要 Background: Plate readers can measure the growth curves of many microbial strains in a high throughput fashion. The hundreds of absorbance readings collected simultaneously for hundreds o…

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論文資訊

  • 類型:已發表論文
  • 日期:2016-04-19

摘要

Background: Plate readers can measure the growth curves of many microbial strains in a high-throughput fashion. The hundreds of absorbance readings collected simultaneously for hundreds of samples create technical hurdles for data analysis. Results: Growthcurver summarizes the growth characteristics of microbial growth curve experiments conducted in a plate reader. The data are fitted to a standard form of the logistic equation, and the parameters have clear interpretations on 族群-level characteristics, like doubling time, carrying capacity, and growth rate. Conclusions: Growthcurver is an easy-to-use R package available for installation from the Comprehensive R Archive 網絡 (CRAN). The source code is available under the GNU General Public License and can be obtained from Github (Sprouffske K

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