聖塔非研究所

時間一致的協調圖和禁止的時間旅行

2018-02-05 · 已發表論文 · 更新 2026/08/30 下午12:48

摘要 Background: In the absence of horizontal gene transfer it is possible to reconstruct the history of gene families from empirically determined orthology relations, which are equivalent to …

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論文資訊

  • 類型:已發表論文
  • 日期:2018-02-05

摘要

Background: In the absence of horizontal gene transfer it is possible to reconstruct the history of gene families from empirically determined orthology relations, which are equivalent to event-labeled gene trees. Knowledge of the event labels considerably simplifies the problem of reconciling a gene tree T with a 物種 trees S, relative to the reconciliation problem without prior knowledge of the event types. It is well-known that optimal reconciliations in the unlabeled case may violate time-consistency and thus are not 生物ly feasible. Here we investigate the 數學 structure of the event labeled reconciliation problem with horizontal transfer. Results: We investigate the issue of time-consistency for the event-labeled version of the reconciliation problem, provide a convenient axiomatic framewor

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