聖塔非研究所

摘要 Understanding noise in 網絡s and finding the right

2022-01-19 · 已發表論文 · 更新 2026/08/30 下午12:48

摘要 Understanding noise in 網絡s and finding the right scale to represent a system are important problems in 網絡 biology. Most research focuses on the raw, micro scale 網絡 from data/simulations a…

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  • 類型:已發表論文
  • 日期:2022-01-19

摘要

Understanding noise in 網絡s and finding the right scale to represent a system are important problems in 網絡 biology. Most research focuses on the raw, micro-scale 網絡 from data/simulations and seldom explores the scale dependence of properties. Here, we introduce the einet package, which looks at the most informative scale in a 生物 網絡 using recent concepts from 資訊 theory and 網絡 science. einet uses two metrics: Effective 資訊, which measures the interplay between degeneracy and determinism in a 網絡's edges, and causal 湧現, which finds the scale of the 網絡 with the highest effective 資訊. einet is available in R and Python and provides tools to explore noise and scale dependency in 網絡s as well as compare 資訊 flow and noise across 網絡s.

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